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    "orbi_define_blocks_for_dual_inlet",
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    "orbi_filter_isotopocules",
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    "orbi_filter_weak_isotopocules",
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    "orbi_flag_weak_isotopocules",
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    "orbi_get_data",
    "orbi_get_example_files",
    "orbi_get_isotopocule_coverage",
    "orbi_get_option",
    "orbi_get_options",
    "orbi_get_problems",
    "orbi_get_settings",
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    "orbi_options",
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    "orbi_peak_flags_to_text",
    "orbi_plot_isotopocule_coverage",
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    "orbi_plot_satellite_peaks",
    "orbi_plot_shot_noise",
    "orbi_plot_spectra",
    "orbi_read_isox",
    "orbi_read_raw",
    "orbi_register_aggregator",
    "orbi_segment_blocks",
    "orbi_set_settings",
    "orbi_show_problems",
    "orbi_simplify_isox",
    "orbi_start_aggregator",
    "orbi_summarize_results"
  ],
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    {
      "page": "isoorbi-package",
      "title": "isoorbi: Process Orbitrap Isotopocule Data",
      "topics": [
        "isoorbi-package",
        "isoorbi"
      ]
    },
    {
      "page": "orbi_add_blocks_to_plot",
      "title": "Plot blocks background",
      "topics": [
        "orbi_add_blocks_to_plot"
      ]
    },
    {
      "page": "orbi_adjust_block",
      "title": "Manually adjust a block delimiter",
      "topics": [
        "orbi_adjust_block"
      ]
    },
    {
      "page": "orbi_adjust_blocks",
      "title": "Manually adjust block delimiters",
      "topics": [
        "orbi_adjust_blocks"
      ]
    },
    {
      "page": "orbi_aggregate_raw",
      "title": "Aggregate data from raw files",
      "topics": [
        "orbi_aggregate_raw"
      ]
    },
    {
      "page": "orbi_analyze_shot_noise",
      "title": "Shot noise calculation",
      "topics": [
        "orbi_analyze_shot_noise"
      ]
    },
    {
      "page": "orbi_calculate_ions",
      "title": "Calculate ions from intensities",
      "topics": [
        "orbi_calculate_ions"
      ]
    },
    {
      "page": "orbi_calculate_ratios",
      "title": "Calculate direct isotopocule ratios",
      "topics": [
        "orbi_calculate_ratios"
      ]
    },
    {
      "page": "orbi_calculate_summarized_ratio",
      "title": "Calculate isotopocule ratio",
      "topics": [
        "orbi_calculate_summarized_ratio"
      ]
    },
    {
      "page": "orbi_check_isoraw",
      "title": "Check for the isoorbi raw file reader",
      "topics": [
        "orbi_check_isoraw"
      ]
    },
    {
      "page": "orbi_default_theme",
      "title": "Default isoorbi plotting theme",
      "topics": [
        "orbi_default_theme"
      ]
    },
    {
      "page": "orbi_define_basepeak",
      "title": "Define the denominator for ratio calculation",
      "topics": [
        "orbi_define_basepeak"
      ]
    },
    {
      "page": "orbi_define_block_for_flow_injection",
      "title": "Define data block for flow injection",
      "topics": [
        "orbi_define_block_for_flow_injection"
      ]
    },
    {
      "page": "orbi_define_blocks",
      "title": "Define data blocks",
      "topics": [
        "orbi_define_blocks"
      ]
    },
    {
      "page": "orbi_define_blocks_for_dual_inlet",
      "title": "Binning raw data into blocks for dual inlet analyses",
      "topics": [
        "orbi_define_blocks_for_dual_inlet"
      ]
    },
    {
      "page": "orbi_export_data_to_excel",
      "title": "Export data to excel",
      "topics": [
        "orbi_export_data_to_excel"
      ]
    },
    {
      "page": "orbi_filter_files",
      "title": "Basic generic data files filter",
      "topics": [
        "orbi_filter_files"
      ]
    },
    {
      "page": "orbi_filter_flagged_data",
      "title": "Filter out flagged data",
      "topics": [
        "orbi_filter_flagged_data"
      ]
    },
    {
      "page": "orbi_filter_isotopocules",
      "title": "Filter isotopocules",
      "topics": [
        "orbi_filter_isotopocules"
      ]
    },
    {
      "page": "orbi_filter_isox",
      "title": "Filter isox files",
      "topics": [
        "orbi_filter_isox"
      ]
    },
    {
      "page": "orbi_filter_satellite_peaks",
      "title": "Function replaced by 'orbi_flag_satellite_peaks()'",
      "topics": [
        "orbi_filter_satellite_peaks"
      ]
    },
    {
      "page": "orbi_filter_scan_intensity",
      "title": "Function replaced by 'orbi_flag_outliers()'",
      "topics": [
        "orbi_filter_scan_intensity"
      ]
    },
    {
      "page": "orbi_filter_weak_isotopocules",
      "title": "Function replaced by 'orbi_flag_weak_isotopocules()'",
      "topics": [
        "orbi_filter_weak_isotopocules"
      ]
    },
    {
      "page": "orbi_find_isox",
      "title": "Find isox files",
      "topics": [
        "orbi_find_isox"
      ]
    },
    {
      "page": "orbi_find_raw",
      "title": "Find raw files",
      "topics": [
        "orbi_find_raw"
      ]
    },
    {
      "page": "orbi_flag_outliers",
      "title": "Flag outlier scans",
      "topics": [
        "orbi_flag_outliers"
      ]
    },
    {
      "page": "orbi_flag_satellite_peaks",
      "title": "Flag minor satellite peaks Flags minor signals for an isotopocule that matches multiple peaks within its exact mass +/- tolerance interval in the same scan. These are often small satellite peaks generated by the Fourier transform. However, if there are satelite peaks of high intensity or very many satellite peaks, it can indicate that the m/z and tolerance setting used for identifying isotopcules need to be revisited. Visualize the flagged satellite peaks with 'orbi_plot_satellite_peaks()'.",
      "topics": [
        "orbi_flag_satellite_peaks"
      ]
    },
    {
      "page": "orbi_flag_weak_isotopocules",
      "title": "Flag weak isotopocules",
      "topics": [
        "orbi_flag_weak_isotopocules"
      ]
    },
    {
      "page": "orbi_get_blocks_info",
      "title": "Summarize blocks info",
      "topics": [
        "orbi_get_blocks_info"
      ]
    },
    {
      "page": "orbi_get_data",
      "title": "Get data frame from aggregated data",
      "topics": [
        "orbi_get_data"
      ]
    },
    {
      "page": "orbi_get_example_files",
      "title": "Get available example file(s)",
      "topics": [
        "orbi_get_example_files"
      ]
    },
    {
      "page": "problems",
      "title": "Retrieve parsing problems",
      "topics": [
        "orbi_get_problems",
        "orbi_show_problems"
      ]
    },
    {
      "page": "orbi_get_settings",
      "title": "Get all isoorbi package settings",
      "topics": [
        "orbi_get_settings"
      ]
    },
    {
      "page": "orbi_identify_isotopocules",
      "title": "Identify isotopocules",
      "topics": [
        "orbi_identify_isotopocules"
      ]
    },
    {
      "page": "orbi_options",
      "title": "Package options",
      "topics": [
        "get_pkg_options",
        "orbi_get_option",
        "orbi_get_options",
        "orbi_options"
      ]
    },
    {
      "page": "orbi_peak_flags",
      "title": "Peak flags",
      "topics": [
        "orbi_peak_flags",
        "orbi_peak_flags_include",
        "orbi_peak_flags_to_text"
      ]
    },
    {
      "page": "orbi_isotopocule_coverage",
      "title": "Isotopocule coverage",
      "topics": [
        "orbi_get_isotopocule_coverage",
        "orbi_plot_isotopocule_coverage"
      ]
    },
    {
      "page": "orbi_plot_raw_data",
      "title": "Visualize data",
      "topics": [
        "orbi_plot_raw_data"
      ]
    },
    {
      "page": "orbi_plot_satellite_peaks",
      "title": "Visualize satellite peaks",
      "topics": [
        "orbi_plot_satellite_peaks"
      ]
    },
    {
      "page": "orbi_plot_shot_noise",
      "title": "Make a shot noise plot",
      "topics": [
        "orbi_plot_shot_noise"
      ]
    },
    {
      "page": "orbi_plot_spectra",
      "title": "Plot mass spectra",
      "topics": [
        "orbi_plot_spectra"
      ]
    },
    {
      "page": "orbi_read_isox",
      "title": "Read IsoX file",
      "topics": [
        "orbi_read_isox"
      ]
    },
    {
      "page": "orbi_read_raw",
      "title": "Read RAW files",
      "topics": [
        "orbi_read_raw"
      ]
    },
    {
      "page": "orbi_segment_blocks",
      "title": "Segment data blocks",
      "topics": [
        "orbi_segment_blocks"
      ]
    },
    {
      "page": "orbi_set_settings",
      "title": "Set package settings",
      "topics": [
        "orbi_set_settings"
      ]
    },
    {
      "page": "orbi_simplify_isox",
      "title": "Simplify IsoX data",
      "topics": [
        "orbi_simplify_isox"
      ]
    },
    {
      "page": "orbi_aggregator",
      "title": "Dynamic data agreggator",
      "topics": [
        "orbi_add_to_aggregator",
        "orbi_get_aggregator",
        "orbi_register_aggregator",
        "orbi_start_aggregator"
      ]
    },
    {
      "page": "orbi_summarize_results",
      "title": "Generate the results table",
      "topics": [
        "orbi_summarize_results"
      ]
    }
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